Halotolerance

Halotolerance is the ability of organisms to live in salt concentrations beyond which is necessary for their growth[1]. Halotolerant species are found in saline waters and soils[1]. Halotolerant microorganisms include bacteria[2], archaea[3], and fungi[4]. Halophilic microorganisms require salt to grow[5]; halotolerant organisms may be classified as some degree halophilic, but are often contrasted from halophiles because halotolerant organisms do not require a high-salinity environment[4]. Halotolerant microorganisms are of considerable biotechnological interest[6] as their roles in saline ecosystems remains unknown[4].

Applications

Fields of scientific research relevant to halotolerance include biochemistry, molecular biology, cell biology, physiology, ecology, and genetics.

Studying the mechanisms of halotolerance in microorganisms can be applied to organism growth and ecosystem dynamics in increasingly saline environments [7]. Halotolerance can be applied to pollution and climate change; processes of halotolerance may be implemented to limit the damages of pollution[7].

Some halotolerant microorganisms are able to use light energy to generate proton and chloride gradients which allows bioenergetic processes to occur[6]. The light-transducing protein, bacteriorhodopsin, allows this pathway to occur and has applications in holography, artificial retina, neutral network optical computing, and other technical methods[8].

Halotolerant microorganisms may be utilized as bioremidators in contaminated soils and in waste water [7]. Certain halotolerant organisms are able to produce biosurfactants in saline environments polluted by hydrocarbons[6] where other organisms may be unable to survive and produce biosurfactants. Halotlerant bacteria effectively remediate saline soil by lowering the Na contents and sodium absorption ratios in soil and by degrading toxic compounds [9].

Fermentation processes in food that use salt can utilize halotolerant organisms. Lactobacillus pantarum is used in the production of pickles and sauerkraut, and other halotolerant bacteria are used in the production fish sauce and soy sauces[6].

Goals of studying halotolerance include increasing the agricultural productivity of lands affected by soil salination or where only saline water is available. Salinity limits crop productivity and growth, so conventional agricultural species could be made more halotolerant by gene transfer from naturally halotolerant species (by conventional breeding or genetic engineering) or by applying treatments developed from an understanding of the mechanisms halotolerance[10].

Environment stressors like drought and extreme temperatures can involve or induce osmotic changes, so applying knowledge of halotolerance is relevant to environments with extremes in moisture or temperature[11].

Bioactive metabolites of halotolerant organisms may limit the growth of cancer, especially lung and breast cancer, and may have applications in chemotherapy resistance and treatment-related toxicity[12].

Cellular functions of halotolerant organisms

Tolerance of high salt conditions occurs through several physiological mechanisms. High concentrations of salt in soil or water that plants live in can trigger ionic imbalances which cause complications in respiration and photosynthesis, leading to reduced rates of growth, injury and death in severe cases[13]. To be considered tolerant of saline conditions, the protoplast must show methods of balancing the toxic and osmotic effects of the increased salt concentrations.

Halotolerant organisms must cope with the stress of changing and high salinity[14]; osmotic stress and ionic stress is put on cells in high salinity[15]. An environment of high salinity leads to loss of water in the cell, so halotolerant organisms have developed mechanisms to retain water and sequester salt within the cell[1]. Halotolerant organisms may utilize a combination of mechanisms to tolerate high salinity environments.

Halotolerant organisms maintain osmotic balance by producing or accumulating osmoprotectants[14]. This mechanism allows the cell to retain water in conditions of high salinity by maintaining water uptake without disrupting metabolic cellular processes. In response to high salinity, the rate of transcription of genes for compatible solutes is increased[14].

In many halotolerant organisms high levels of salt are absorbed by cells to maintain an osmotic potential lower than that of the environment to ensure water uptake. A mechanism of tolerating excessive salt in halotolerant organisms is the sequestration of salt into a vacuole. This keeps the concentration of salt in the cell's cytoplasm low so that the metabolic activities of the cell can continue[16].

In some organisms, flagellum-related genes are down-regulated in environments with high concentrations of salt which conserves energy of motion to be used in osmoprotection[17].

Bacterial halotolerance

The extent of halotolerance varies widely amongst different species of bacteria.[18] A number of cyanobacteria are halotolerant, such as the cyanobacteria of Makgadikgadi Pans, a large hypersaline lake in Botswana[19]. Cyanobacteria possess a high level of physiological flexibility; recent research on the mechanisms of halotolerance in cyanobacteria using omics approaches aim to identify the gene networks and biochemical pathways of halotolerance like those that produce osmoprotectants[20].

Fungal halotolerance

Before the 2000s, it was commonly believed that fungi did not inhabit extremely saline environments, but research has disproved the idea by finding fungi in solar salterns[21]. Fungi from habitats with high concentration of salt are mostly halotolerant, few are halophilic[15]. Halotolerant fungi constitute a relatively large and constant part of hypersaline environment communities, such as those in the solar salterns.[22] Well studied examples include the yeast Debaryomyces hansenii and black yeasts Aureobasidium pullulans and Hortaea werneckiiwhich can grow in hyper saline conditions, making them model organisms to study halotolerance [21]. The latter can grow in media without salt, as well as in almost saturated NaCl solutions. To emphasize this unusually wide adaptability, some authors describe H. werneckii as "extremely halotolerant".[23]

Mechanisms of halotolerance in fungi include regulating intracellular ion concentrations and accumulating osmoprotectants to maintain osmotic balance without toxicity or disrupting cellular metabolic activity[21].

See also

References

  1. ^ a b c Antón, Josefa (2011), "Halotolerance", Encyclopedia of Astrobiology, Springer, Berlin, Heidelberg, p. 727, doi:10.1007/978-3-642-11274-4_695, ISBN 978-3-642-11274-4, retrieved 2026-02-25
  2. ^ "Halotolerant - Knowledge and References". Taylor & Francis. Retrieved 2026-02-25.
  3. ^ Matarredona, Laura; Zafrilla, Basilio; Camacho, Mónica; Bonete, María-José; Esclapez, Julia (December 2024). "Understanding the tolerance of halophilic archaea to stress landscapes". Environmental Microbiology Reports. 16 (6) e70039. Bibcode:2024EnvMR..16E0039M. doi:10.1111/1758-2229.70039. ISSN 1758-2229. PMC 11578932. PMID 39568122.
  4. ^ a b c Suryanarayanan, T. S.; Ravishankar, J. P. (2023-12-01). "They too serve who tolerate and survive: the need to study halotolerant fungi to appreciate their role in saline ecosystems". Fungal Biology Reviews. 46 100328. Bibcode:2023FunBR..4600328S. doi:10.1016/j.fbr.2023.100328. ISSN 1749-4613.
  5. ^ Vreeland, R. H. (1987). "Mechanisms of halotolerance in microorganisms". Critical Reviews in Microbiology. 14 (4): 311–356. doi:10.3109/10408418709104443. ISSN 1040-841X. PMID 3308318.
  6. ^ a b c d Margesin, Rosa; Schinner, Franz (2001-04-01). "Potential of halotolerant and halophilic microorganisms for biotechnology". Extremophiles. 5 (2): 73–83. doi:10.1007/s007920100184. ISSN 1431-0651.
  7. ^ a b c Martínez-Espinosa, Rosa María; Kumar, Sumit; DasSarma, Shiladitya (2026). "Editorial: Adaptation of halophilic/halotolerant microorganisms and their applications, volume II". Frontiers in Microbiology. 17 1780220. doi:10.3389/fmicb.2026.1780220. ISSN 1664-302X. PMC 12900378. PMID 41695952.
  8. ^ "Bacteriorhodopsin - an overview | ScienceDirect Topics". www.sciencedirect.com. Retrieved 2026-02-25.
  9. ^ "Halotolerant - Knowledge and References". Taylor & Francis. Retrieved 2026-03-06.
  10. ^ Afzal, Muhammad; Hindawi, Salah El Sayed; Alghamdi, Salem Safer; Migdadi, Hussein H.; Khan, Muhammad Altaf; Hasnain, Muhammad Usama; Arslan, Muhammad; Habib ur Rahman, Muhammad; Sohaib, Muhammad (2023-06-01). "Potential Breeding Strategies for Improving Salt Tolerance in Crop Plants". Journal of Plant Growth Regulation. 42 (6): 3365–3387. Bibcode:2023JPGR...42.3365A. doi:10.1007/s00344-022-10797-w. ISSN 1435-8107.
  11. ^ Orzoł, Aleksandra; Głowacka, Katarzyna; Pätsch, Ricarda; Piernik, Agnieszka; Gallegos-Cerda, Susana Dianey; Cárdenas-Pérez, Stefany (2025-04-16). "The local environment influences salt tolerance differently in four Salicornia europaea L. inland populations". Scientific Reports. 15 (1): 13128. Bibcode:2025NatSR..1513128O. doi:10.1038/s41598-025-97394-5. ISSN 2045-2322. PMC 12003738.
  12. ^ Fang, Longteng; Xu, Liping; Kader, Marhaba; Ding, Tingting; Lu, Shiyang; Wang, Dong; Sharma, Amit Raj; Zhang, Zhiwei (2025-07-24). "Salt-Adapted Microorganisms: A Promising Resource for Novel Anti-Cancer Drug Discovery". Marine Drugs. 23 (8): 296. doi:10.3390/md23080296. ISSN 1660-3397. PMC 12387818. PMID 40863613.
  13. ^ Shrivastava, Pooja; Kumar, Rajesh (March 2015). "Soil salinity: A serious environmental issue and plant growth promoting bacteria as one of the tools for its alleviation". Saudi Journal of Biological Sciences. 22 (2): 123–131. doi:10.1016/j.sjbs.2014.12.001. ISSN 1319-562X. PMC 4336437. PMID 25737642.
  14. ^ a b c Zhou, Peng; Bu, Yu-Xin; Xu, Lin; Xu, Xue-Wei; Shen, Hong-Bin (2023-03-13). "Understanding the mechanisms of halotolerance in members of Pontixanthobacter and Allopontixanthobacter by comparative genome analysis". Frontiers in Microbiology. 14 1111472. doi:10.3389/fmicb.2023.1111472. ISSN 1664-302X. PMC 10040529. PMID 36992937.
  15. ^ a b Plemenitaš, Ana; Lenassi, Metka; Konte, Tilen; Kejžar, Anja; Zajc, Janja; Gostinčar, Cene; Gunde-Cimerman, Nina (2014). "Adaptation to high salt concentrations in halotolerant/halophilic fungi: a molecular perspective". Frontiers in Microbiology. 5: 199. doi:10.3389/fmicb.2014.00199. ISSN 1664-302X. PMC 4017127. PMID 24860557.
  16. ^ Oi, Takao; Clode, Peta L.; Taniguchi, Mitsutaka; Colmer, Timothy D.; Kotula, Lukasz (May 2022). "Salt tolerance in relation to elemental concentrations in leaf cell vacuoles and chloroplasts of a C4 monocotyledonous halophyte". Plant, Cell & Environment. 45 (5): 1490–1506. doi:10.1111/pce.14279. ISSN 1365-3040. PMC 9305513. PMID 35128687.
  17. ^ Chen, Yan-Huey; Lu, Chia-Wei; Shyu, Yuan-Tay; Lin, Shih-Shun (2017-10-12). "Revealing the Saline Adaptation Strategies of the Halophilic Bacterium Halomonas beimenensis through High-throughput Omics and Transposon Mutagenesis Approaches". Scientific Reports. 7 (1): 13037. Bibcode:2017NatSR...713037C. doi:10.1038/s41598-017-13450-9. ISSN 2045-2322. PMC 5638851.
  18. ^ Dieter Häussinger and Helmut Sies (2007) Osmosensing and Osmosignaling, Academic Press, 579 pages ISBN 0-12-373921-7
  19. ^ Filippidou, Sevasti; Price, Alex; Spencer-Jones, Charlotte; Scales, Anthony; Macey, Michael C.; Franchi, Fulvio; Lebogang, Lesedi; Cavalazzi, Barbara; Schwenzer, Susanne P.; Olsson-Francis, Karen (2024-01-11). "Diversity of Microbial Mats in the Makgadikgadi Salt Pans, Botswana". Microorganisms. 12 (1): 147. doi:10.3390/microorganisms12010147. ISSN 2076-2607. PMC 10818877. PMID 38257974.
  20. ^ Waditee-Sirisattha, Rungaroon; Kageyama, Hakuto (2023-02-01). "Halotolerance, stress mechanisms, and circadian clock of salt-tolerant cyanobacteria". Applied Microbiology and Biotechnology. 107 (4): 1129–1141. doi:10.1007/s00253-023-12390-x. ISSN 1432-0614. PMID 36700967.
  21. ^ a b c Gunde-Cimerman, Nina; Ramos, Jose; Plemenitaš, Ana (2009-11-01). "Halotolerant and halophilic fungi". Mycological Research. 113 (11): 1231–1241. doi:10.1016/j.mycres.2009.09.002. ISSN 0953-7562. PMID 19747974.
  22. ^ Zajc, J.; Zalar, P.; Plemenitaš, A.; Gunde-Cimerman, N. (2012). "The Mycobiota of the Salterns". Biology of Marine Fungi. Progress in Molecular and Subcellular Biology. Vol. 53. pp. 133–158. doi:10.1007/978-3-642-23342-5_7. ISBN 978-3-642-23341-8. PMID 22222830.
  23. ^ Gostinčar, C.; Lenassi, M.; Gunde-Cimerman, N.; Plemenitaš, A. (2011). Fungal Adaptation to Extremely High Salt Concentrations. Advances in Applied Microbiology. Vol. 77. pp. 71–96. doi:10.1016/B978-0-12-387044-5.00003-0. ISBN 978-0-12-387044-5. PMID 22050822.